{ "_id": "6a105620acfb0bcc41ca29a5", "Package": "DIscBIO", "Date": "2026-01-08", "Title": "A User-Friendly Pipeline for Biomarker Discovery in Single-Cell\nTranscriptomics", "Version": "1.2.3.9001", "Authors@R": "c(\nperson(\ngiven = \"Salim\",\nfamily = \"Ghannoum\",\nrole = c(\"aut\", \"cph\"),\nemail = \"salim.ghannoum@medisin.uio.no\"\n),\nperson(\ngiven = \"Alvaro\",\nfamily = \"Köhn-Luque\",\nrole = c(\"aut\", \"ths\"),\nemail = \"alvaro.kohn-luque@medisin.uio.no\"\n),\nperson(\ngiven = \"Waldir\",\nfamily = \"Leoncio\",\nrole = c(\"cre\", \"aut\"),\nemail = \"w.l.netto@medisin.uio.no\"\n),\nperson(\ngiven = \"Damiano\",\nfamily = \"Fantini\",\nrole = c(\"ctb\")\n)\n)", "Description": "An open, multi-algorithmic pipeline for easy, fast and\nefficient analysis of cellular sub-populations and the\nmolecular signatures that characterize them. The pipeline\nconsists of four successive steps: data pre-processing,\ncellular clustering with pseudo-temporal ordering, defining\ndifferential expressed genes and biomarker identification. More\ndetails on Ghannoum et. al. (2021) .\nThis package implements extensions of the work published by\nGhannoum et. al. (2019) .", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "LazyData": "true", "RoxygenNote": "7.3.3", "URL": "https://github.com/ocbe-uio/DIscBIO", "BugReports": "https://github.com/ocbe-uio/DIscBIO/issues", "Collate": "'DIscBIO-classes.R' 'DIscBIO-generic-ClassVectoringDT.R'\n'DIscBIO-generic-ClustDiffGenes.R' 'DIscBIO-generic-Clustexp.R'\n'DIscBIO-generic-DEGanalysis.R'\n'DIscBIO-generic-DEGanalysis2clust.R'\n'DIscBIO-generic-Exprmclust.R'\n'DIscBIO-generic-FinalPreprocessing.R'\n'DIscBIO-generic-FindOutliers.R'\n'DIscBIO-generic-NoiseFiltering.R'\n'DIscBIO-generic-Normalizedata.R'\n'DIscBIO-generic-PCAplotSymbols.R'\n'DIscBIO-generic-PlotmclustMB.R'\n'DIscBIO-generic-clusteringOrder.R'\n'DIscBIO-generic-clustheatmap.R' 'DIscBIO-generic-comptSNE.R'\n'DIscBIO-generic-plotExptSNE.R' 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}, "Author": "Salim Ghannoum [aut, cph],\nAlvaro Köhn-Luque [aut, ths],\nWaldir Leoncio [cre, aut],\nDamiano Fantini [ctb]", "Maintainer": "Waldir Leoncio ", "MD5sum": "8630126834601498e25c8145bbeed779", "_user": "ocbe-uio", "_type": "src", "_file": "DIscBIO_1.2.3.9001.tar.gz", "_fileid": "eab11a12f5081dcc85089f4a650b78d2e39f2d07073d7bcdd1eb39619c1016bd", "_filesize": 1288460, "_sha256": "eab11a12f5081dcc85089f4a650b78d2e39f2d07073d7bcdd1eb39619c1016bd", "_created": "2026-05-09T07:54:59.000Z", "_published": "2026-05-22T13:12:00.449Z", "_distro": "noble", "_jobs": [ { "job": 77386104686, "time": 385, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6894170265" }, { "job": 77386104472, "time": 396, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6894171130" }, { "job": 77386104872, "time": 238, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "6894159203" }, { "job": 77386104938, "time": 242, "config": 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